Recently Published
Pig weight prediction
Pig weight prediction to model sort loss
example
This is just an example of Rmarkdown generated with quarto
Power computation for PFOA analyses
Power calculations for mean comparison and correlation testing in PFOA studies.
Summary of meat quality populations
Brief summary of 3 datasets used for META-GWAs of pork quality (Bernal Rubio et al 2015). These datasets will be the toy-example for federated and transfer learning
Dyadic data analysis
Zero inflated log-normal
Ripasudil
Ripasudil study statistical analysis report for Komaromy Lab
AHFR
Analysis of variables in AHFR dataset. Komaromy group.
Capsid variartion GFP
analysis of pseudoreplicates of capsid variation data
Dyadic data 1
preliminary analysis of aggression data
Significance analysis of CT
This are the results of the preliminary analysis of CT, we need to decide if we want to edit the data or adjust the models in any way.
Analysis of extra variables
In this analysis, dpi<0 were set to 0
Convergence Diagnostics
Convergence diagnostics of feeder data example
IOP_adamsts10
Diurnal intraocular pressure in dogs with ADAMSTS10 open angle glaucoma
Report Bursian
A report on analysis of ordinal data, lesion scores in mink for Bursian Lab
Sample FIRE feeder report
This is a very simple report I created from firefeeders's first 24hrs of data
Fitting animal models that include between breed mean differences and heterosis
This is a test run for Andres' paper
Example bivariate gblup analyses using gwaR
This page shows examples of bivariate gblup analyses using gwaR mixed model package. It requires a number of external functions that will soon be available in the gwaR package.
Document
Second pass of carcass phenotype analyses
Carcass weight phenotype EDA
A quick and dirty check of Carcass and weight data from our behavioral genetics project
class_5
Genomic prediction model: GBLUP
Lab 3 - Self Assessment activity
This activity is part of Lab 3 and it will be graded
Lab3_extra
Some extra activities for those who finished lab 3 before the rest of the class.
Lab 3 - alternative activity
This is an alternative activity for students in ANS 824
Instead of programming a function they can interpret the code provided here.