Kazuki Yoshida

Recently Published

Bayesian Causal Inference 1
Beta Regression in Stan
Dirichlet Process Prior
rstanarm jm
Adaptive LASSO Examples
R Bootcamp Day 1
R Bootcamp Day 2
Carlisle Anaesthesia. 2017
05 regression modeling
04 statistical tools
03 ggplot2: grammar of graphics
Methods 2011
Coupling from the Past
Transition Matrix
Matching Weights Tutorial
A tutorial accompanying a manuscript and simulation program (
GLMM with various R packages
Python in Rmd
MI examples
CRAN tableone download log
Mahalanobis distance
Fisher exact test explained
Epi Qual 2007 Q1
Poisson Regression in Stan
Two-level linear model in Stan
Confounder Generation
BIO233 Birth weight example
Number of observations
pi calculation
Introduction to tableone
Hack Ebola
SIR model
BIO 232 Permutation test
Formatting data for ggplot2
Different parametrization
Data generation for ROC demo
Binomial Confidence Interval
group summaries
Plotting group mean responses
igraph demonstration
d3Network demonstration
igraph demonstration
More ggplot2
Handling time data
Tests for paired proportions
Basic graphics
Accelerated failure time models
Functions used in CRAN packages
CRAN download log for tableone
Use of formula
Anscombe dataset
Converting data
cramVars feature test
2014-02-13 useR@HSPH
tableone CreateCatTable() test
Proportional odds model
Multiple Imputation Examples
Case-control studies in R
Linear discriminant analysis.
S3 Class and Methods in R
Polynomials and Splines
EPI247 Group Session
ROC after logistic regression
Simple 3D plots in R
SIR models in R
Competing risk analysisのデモ
Venn diagrams
Cubit spline test run
Emulating SAS BY statement in R
Cox regression in R
EPI204 Lab 4 in R
EPI204 Lab 5 in R
Adjustment for multiple testing
EPI204 Lab 2 in R
EPI204 Lab 1 in R
Drawing survival curves in R
EPI 204 Homework 3 in R
kaz_yos RPubs もくじ
kaz_yos RPubs Table of Contents
Conditional logistic regression
regexp test in R
EPI 204 Homework 2 in R
pROC test run
pROC and large dataset
Summarizing data by groups in R
Basic graphics in R
John Snow’s Cholera Map
BIO 226 AUC-MB contrast
R Color Chart
EPI 271 Propensity Score Lab 2
EPI 271 Lab 1
car::recode solution
A Happy New Year with ggplot2
ggplot2: Plotting functions
ggplot2: stat_summary
Bootstrap (test)
LaplacesDemon package
Bayesian updating
survey package
Group Sequential Methods
Run-length encoding
Epidemiology 202: Homework 3
Polytomous Logistic Regression
Ordinal logistic regression
Biostatistics 213: Homework 8
Post-test probabilities
My knitr configuration
BIO 213 Homework 7
Stepwise model selection
Installing slidify
Happy Thanksgiving!!
Cluster analysis (k-means)
PH207x Week 3
PH207x Week 2
Poisson regression for rates
EPI 202 HW1
Code IQ: ログ解析
PH207x Week 1
Rgraphviz test
Categorical Data with R
Using Deducer without GUI
EPI 221 Sep 26
Basic graphing with R
BIO 213 Homework 6
BIO 509 Homework 5
BIO 208 Final Exam
Descriptive statistics with R
Merging data
BIO 213 Homework 4
BIO 201 Homework 5
BIO 509 Homework 3
BIO 509 Homework 1
BIO 201 Homework 4
BIO 201 Homework 3
Probability functions in R
Reading data into R
BIO232 Homework 1
BIO232 Lab 1
BIO 213 Homework 3
20120921 Introduction to R
Biostatistics 201: Lab 1
BIO 201: Homework 2
BIO 509 Examples
Links to other pages of mine
EPI 201 Homework 1
Biostatistics 213: Homework 2
BIO 201: Homework 1
EPI 208 homework2
Homework 1 for EPI 208
BIO 213 homework1
Plotting OR (experimental)
HSPH Materials Translated
subset for a given ggplot2 layer
USA drug sales data extraction
Getting data from
Creating multiple xtabs for different row variables with the same row variable
Categorical counterpart of the previous post.
BIO 206 SAS codes translated to R
BIO 208 SAS codes translated to R
HSPH Summer PCE SAS code translated to R
My solution to "My no loops in R hair shirt"
My solution to:
RDS 286: Case #3 The Lung Nodule
RDS 286: Case #4 HIV Screening
RDS 286: Excercise 3.1
EPI 208: Rate and Risk
Another demo from Rothman's
Effect measures
Demonstration of equations in Epidemiology: An Introduction