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Comparative Genomics MBP Homology
This R Markdown orchestrates the loading, filtering, and annotation of BLAST summary data (percent identity and coverage) for mucus‑binding proteins across Lactobacillus genomes, replacing accessions with gene names and focusing on four key species. It then aggregates each contig’s top hit, ranks them for plotting, and generates faceted heatmaps by protein, species, and disease state (Control vs. rUTI). Finally, it applies Wilcoxon rank‑sum tests to compare homology metrics between conditions and produces concise summary tables of sample sizes, maxima, means, ranges, and standard deviations for both percent identity and coverage.
REAL PLOT PROSEMINAR!!!
Real one this time finally